Tag Archives: Evolution

Ice-Age Euro-trips

Recent works that attempt to get at human migrations inside Europe paint a complex portrait of migratory events, admixture with archaic hominids, and adaptive evolution to new geographies, and a changing global climate. Analyzing whole genomes of 51 ancient humans … Continue reading

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What does the island fox say?

Small populations are characterized by large drift and reduced efficacy of selection effects, which result in fixation of both advantageous and deleterious alleles, accumulation of homozygosity, and often reduction in population fitness. What with plummeting mammal populations across biota, understanding … Continue reading

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New branches on the tree of life

(Trees from Darwin (1837), Haeckel (1866), and Woese (1990)) We’ve come quite a long way since Darwin sketched out his tree in 1837 connecting, with branch tips representing animals and microbes currently in existence and branches and trunks their ancestors. … Continue reading

Posted in bioinformatics, community ecology, evolution, genomics, metagenomics, microbiology, phylogenetics | Tagged , , , , | 1 Comment

What makes a range?

Why do species have restricted geographic distributions? Classic ecological perspectives tell us distribution limits occur where ecological parameters coincide with the boundaries of ecological niches. Evolutionary perspectives, on the other hand, surmise distribution boundaries reflect a failure of niche evolution. Though small … Continue reading

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The why's of sex

Sex isn’t quite what it seems – while superficially wasteful in an evolutionary sense (why inherit on only one half of your genes, when you can inherit all of them asexually, or why waste resources in mating when you don’t … Continue reading

Posted in adaptation, evolution, genomics, mutation, natural history, next generation sequencing, population genetics, selection, theory, yeast | Tagged , , , , | Leave a comment

When times are good or bad, happy or sad, viral quasispecies like to stay together

We’ve known for a long time that symbioses are important across all walks of life. Clownfish and sea anemones are obligate symbionts, and bacteria found in legume root nodules help fix nitrogen. In a nice review published recently in Evolutionary … Continue reading

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There and back again: an angiosperm's tale

Eelgrass (Zostera marina) is the dominant seagrass in the northern hemisphere and provides the foundation of highly productive ecosystems that rival tropical rain forests and coral reefs in ecosystem services. Zostera isn’t really a grass, but a monocot, like a … Continue reading

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Genomics of Hybridization – Part 1

In a series of articles, I will discuss recent advances in hybridization genomics – the fundamentals of adaptive introgression, “islands of speciation”, differential gene flow, and linked selection have been discussed in my previous posts (here, here, and also at … Continue reading

Posted in adaptation, evolution, genomics, methods, natural history, next generation sequencing, pedigree, phylogenetics, plants, population genetics, RNAseq, software, speciation, species delimitation, STRUCTURE, theory, transcriptomics | Tagged , , , , , , | Leave a comment

An evolutionary cycle …

Rescan, Lenormand and Roze (2016) recently published new models on the evolution of life cycles in The American Naturalist. Most animals and protists have diploid life cycles in which the haploid stage is reduced to a single-celled gamete. Other organisms, such … Continue reading

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Earthquakes and rapid evolution

The 1964 Alaskan earthquake was landscape-altering in creating/uplifting numerous islands in the Gulf of Alaska, providing an ideal system to study adaptive evolution of diversification in affected species – the threespine stickleback (Gasterosteus aculeatus) being a widely studied example. In … Continue reading

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