Category Archives: evolution

Ice-Age Euro-trips

Recent works that attempt to get at human migrations inside Europe paint a complex portrait of migratory events, admixture with archaic hominids, and adaptive evolution to new geographies, and a changing global climate. Analyzing whole genomes of 51 ancient humans … Continue reading

Posted in adaptation, evolution, genomics, natural history, Paleogenomics, population genetics, selection | Tagged , , , , , , , , | Leave a comment

What's all the buzz about? Bees got microbiomes too!

So I know we are all blabbing about the human microbiome, who isn’t fascinated by the impressive roles tiny microbes have in our lives!? Trying to unravel what exactly our microbial communities do for us, and how they relate to … Continue reading

Posted in Coevolution, community ecology, evolution, genomics, metagenomics, microbiology | Tagged , , | 2 Comments

On Integrative Species Delimitation…

Accurate delimitation of species is a fundamental first step that underlies much of what we do in biology. But this can prove challenging in many situations. Why? Let me count the ways. Incomplete lineage sorting, hybridization, morphological conservatism, and niche … Continue reading

Posted in evolution, methods, phylogeography, population genetics, software, species delimitation | 1 Comment

Signatures of the reproductive lottery

In marine populations, effective population sizes are usually several orders of magnitude lower than the census size. This difference is thought to be driven by high fecundity, variation in reproductive success and pronounced early mortality, resulting in genetic drift across generations. In … Continue reading

Posted in evolution, natural history, population genetics, selection | Tagged , , , , | Leave a comment

What does the island fox say?

Small populations are characterized by large drift and reduced efficacy of selection effects, which result in fixation of both advantageous and deleterious alleles, accumulation of homozygosity, and often reduction in population fitness. What with plummeting mammal populations across biota, understanding … Continue reading

Posted in adaptation, evolution, genomics, mutation, natural history, population genetics, selection | Tagged , , , | 1 Comment

Disentangling the wolf-coyote admixture through an ancestry-based approach

Large carnivores like bears and wolves still pose a puzzle for systematics and population genetics. The more data we get, the more complex their evolutionary history seems to be.

Posted in conservation, evolution, genomics, population genetics | Tagged , , , | Leave a comment

The slow, and sometimes incomplete, journey to diploidy

Whether you are reading this as a plant, an animal, or fungus, it is likely that some ancestor of yours doubled up on genomes. However, it is likely that these extra genomes disappeared over evolutionary time. What gives? Where are those extra … Continue reading

Posted in evolution, genomics, quantitative genetics, speciation | Tagged , , | 1 Comment

Sweeps and Demographic Inference

Population genetics presents us with numerous conundrums – several of which have to do with how the same genomic disposition can be “reached” over evolutionary time with multiple alternate demographic or selective processes. I have discussed several of these issues … Continue reading

Posted in bioinformatics, evolution, genomics, population genetics, selection, theory | Tagged , , , | Leave a comment

One of these things is not like the other……

While we know that bacteria are pretty scandalous with their DNA, not minding horizontal gene transfer (HGT) and such (which can be pretty confounding when trying to discuss species concepts), and although it’s clear that this kind of genetic material … Continue reading

Posted in Coevolution, evolution, genomics, horizontal gene transfer | Tagged , , , | Leave a comment

The simpler cichlid: a recent adaptive radiation

If I was asked to name a few of the most compelling systems in evolutionary biology, I’d certainly start with Darwin’s Finches. Next might come peppered moths, African cichlids, stickleback, Caribbean Anolis lizards, or Lenski’s E. coli. What’s interesting about … Continue reading

Posted in adaptation, evolution, selection, speciation | Leave a comment